Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC104457.1-201ENST00000401024 814 ntBASIC13.96□□□□□ -0.17
HCN1O60741 NUS1P3-201ENST00000423502 862 ntBASIC13.96□□□□□ -0.17
HCN1O60741 AC016694.1-201ENST00000434179 700 ntBASIC13.96□□□□□ -0.17
HCN1O60741 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
HCN1O60741 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 CTBP2P5-201ENST00000454986 1264 ntBASIC13.96□□□□□ -0.17
HCN1O60741 AC007551.1-201ENST00000457394 519 ntBASIC13.96□□□□□ -0.17
HCN1O60741 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.96□□□□□ -0.17
HCN1O60741 AC119751.2-201ENST00000504529 210 ntBASIC13.96□□□□□ -0.17
HCN1O60741 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.96□□□□□ -0.17
HCN1O60741 AP000812.2-201ENST00000538934 718 ntBASIC13.96□□□□□ -0.17
HCN1O60741 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HCN1O60741 SNX29P1-201ENST00000548357 1007 ntBASIC13.96□□□□□ -0.17
HCN1O60741 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.96□□□□□ -0.17
HCN1O60741 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.96□□□□□ -0.17
HCN1O60741 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.96□□□□□ -0.17
HCN1O60741 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.96□□□□□ -0.17
HCN1O60741 BX539320.1-201ENST00000623759 877 ntBASIC13.96□□□□□ -0.17
HCN1O60741 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.96□□□□□ -0.17
HCN1O60741 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HCN1O60741 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
HCN1O60741 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.96□□□□□ -0.18
HCN1O60741 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
HCN1O60741 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HCN1O60741 REXO1L4P-201ENST00000605109 1937 ntBASIC13.96□□□□□ -0.18
HCN1O60741 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.95□□□□□ -0.18
HCN1O60741 AC117489.1-201ENST00000625169 3217 ntBASIC13.95□□□□□ -0.18
HCN1O60741 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HCN1O60741 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.95□□□□□ -0.18
HCN1O60741 C2orf27AP3-201ENST00000434123 579 ntBASIC13.95□□□□□ -0.18
HCN1O60741 RPL7P3-201ENST00000441388 714 ntBASIC13.95□□□□□ -0.18
HCN1O60741 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
HCN1O60741 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.95□□□□□ -0.18
HCN1O60741 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.95□□□□□ -0.18
HCN1O60741 AC079316.1-201ENST00000548397 411 ntBASIC13.95□□□□□ -0.18
HCN1O60741 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.95□□□□□ -0.18
HCN1O60741 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.95□□□□□ -0.18
HCN1O60741 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 AL354718.3-201ENST00000616414 581 ntBASIC13.95□□□□□ -0.18
HCN1O60741 CR382287.1-201ENST00000623954 586 ntBASIC13.95□□□□□ -0.18
HCN1O60741 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HCN1O60741 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.95□□□□□ -0.18
HCN1O60741 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HCN1O60741 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.94□□□□□ -0.18
HCN1O60741 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HCN1O60741 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.94□□□□□ -0.18
HCN1O60741 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HCN1O60741 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms