Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
SLC28A2O43868 AP001063.1-201ENST00000568332 529 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 CLUHP6-201ENST00000580789 941 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC28A2O43868 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 MSTO2P-201ENST00000314835 1709 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A2O43868 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC28A2O43868 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC28A2O43868 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 INTS4P1-203ENST00000641008 3683 ntBASIC14.39□□□□□ -0.11
SLC28A2O43868 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC28A2O43868 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC28A2O43868 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A2O43868 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC28A2O43868 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC28A2O43868 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC28A2O43868 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.39□□□□□ -0.11
SLC28A2O43868 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 LINC00552-201ENST00000625151 2579 ntBASIC14.39□□□□□ -0.11
SLC28A2O43868 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A2O43868 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A2O43868 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A2O43868 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A2O43868 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A2O43868 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 AC012508.2-201ENST00000567613 1472 ntBASIC14.38□□□□□ -0.11
SLC28A2O43868 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A2O43868 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A2O43868 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A2O43868 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SLC28A2O43868 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.38□□□□□ -0.11
SLC28A2O43868 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 TOMM22P5-201ENST00000416399 439 ntBASIC14.38□□□□□ -0.11
SLC28A2O43868 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.38□□□□□ -0.11
SLC28A2O43868 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC28A2O43868 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A2O43868 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC28A2O43868 AC093433.1-201ENST00000458048 571 ntBASIC14.38□□□□□ -0.11
SLC28A2O43868 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.38□□□□□ -0.11
SLC28A2O43868 AC120045.2-201ENST00000567334 178 ntBASIC14.38□□□□□ -0.11
SLC28A2O43868 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A2O43868 HLA-C-210ENST00000640219 976 ntBASIC14.38□□□□□ -0.11
SLC28A2O43868 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms