Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 BX088702.1-201ENST00000610784 235 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AL162274.1-201ENST00000617191 1098 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 RHOXF1P1-202ENST00000635473 501 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AC139749.1-202ENST00000617529 3139 ntBASIC13.22□□□□□ -0.29
TRAF3IP2O43734 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AC026748.1-201ENST00000624349 3251 ntBASIC13.22□□□□□ -0.29
TRAF3IP2O43734 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 BOLA2P3-201ENST00000404566 256 ntBASIC13.22□□□□□ -0.29
TRAF3IP2O43734 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 KRT17P8-201ENST00000540749 863 ntBASIC13.22□□□□□ -0.29
TRAF3IP2O43734 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 RN7SL713P-201ENST00000582127 302 ntBASIC13.22□□□□□ -0.29
TRAF3IP2O43734 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 AC073413.1-201ENST00000603927 732 ntBASIC13.22□□□□□ -0.29
TRAF3IP2O43734 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.22□□□□□ -0.29
TRAF3IP2O43734 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF3IP2O43734 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 OR2I1P-210ENST00000642037 4691 ntBASIC13.21□□□□□ -0.29
TRAF3IP2O43734 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF3IP2O43734 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms