Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.97□□□□□ -0.01
KDELR3O43731 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.97□□□□□ -0.01
KDELR3O43731 AL645933.1-201ENST00000440087 609 ntBASIC14.97□□□□□ -0.01
KDELR3O43731 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 RNMTL1P1-201ENST00000454103 560 ntBASIC14.97□□□□□ -0.01
KDELR3O43731 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.97□□□□□ -0.01
KDELR3O43731 AC126915.1-201ENST00000522847 1038 ntBASIC14.97□□□□□ -0.01
KDELR3O43731 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
KDELR3O43731 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.97□□□□□ -0.01
KDELR3O43731 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 BNIP3P13-201ENST00000599968 566 ntBASIC14.97□□□□□ -0.01
KDELR3O43731 AC022748.3-201ENST00000621828 275 ntBASIC14.97□□□□□ -0.01
KDELR3O43731 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 LINC00552-201ENST00000625151 2579 ntBASIC14.97□□□□□ -0.01
KDELR3O43731 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KDELR3O43731 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KDELR3O43731 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KDELR3O43731 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.96□□□□□ -0.01
KDELR3O43731 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 INTS4P1-203ENST00000641008 3683 ntBASIC14.96□□□□□ -0.01
KDELR3O43731 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
KDELR3O43731 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.96□□□□□ -0.01
KDELR3O43731 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.96□□□□□ -0.01
KDELR3O43731 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.96□□□□□ -0.01
KDELR3O43731 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.96□□□□□ -0.01
KDELR3O43731 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.96□□□□□ -0.01
KDELR3O43731 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 AL022328.3-201ENST00000607943 679 ntBASIC14.96□□□□□ -0.01
KDELR3O43731 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.96□□□□□ -0.01
KDELR3O43731 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
KDELR3O43731 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
KDELR3O43731 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KDELR3O43731 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KDELR3O43731 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
KDELR3O43731 TMBIM7P-202ENST00000641474 1516 ntBASIC14.96□□□□□ -0.02
KDELR3O43731 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
KDELR3O43731 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
KDELR3O43731 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.96□□□□□ -0.02
KDELR3O43731 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
KDELR3O43731 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.96□□□□□ -0.02
KDELR3O43731 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
KDELR3O43731 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.95□□□□□ -0.02
KDELR3O43731 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.95□□□□□ -0.02
KDELR3O43731 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
KDELR3O43731 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KDELR3O43731 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.95□□□□□ -0.02
KDELR3O43731 AC215219.1-201ENST00000400706 1817 ntBASIC14.95□□□□□ -0.02
KDELR3O43731 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms