Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXN3O00409 AC041040.2-201ENST00000622926 2899 ntBASIC15.86■□□□□ 0.13
FOXN3O00409 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXN3O00409 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXN3O00409 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXN3O00409 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXN3O00409 KHSRPP1-201ENST00000427983 1768 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 AC005840.4-201ENST00000541242 2494 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
FOXN3O00409 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
FOXN3O00409 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 AC004945.1-201ENST00000416738 983 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 CNN2P8-201ENST00000421872 913 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 FAM8A4P-201ENST00000435433 1213 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 AC007551.1-201ENST00000457394 519 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 AC078819.1-201ENST00000547454 765 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 AC012085.1-201ENST00000548270 765 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXN3O00409 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 OR10B1P-201ENST00000601666 907 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.85■□□□□ 0.13
FOXN3O00409 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXN3O00409 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 CICP16-201ENST00000502609 2813 ntBASIC15.85■□□□□ 0.13
FOXN3O00409 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXN3O00409 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXN3O00409 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FOXN3O00409 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
FOXN3O00409 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 AC016397.2-201ENST00000624848 1985 ntBASIC15.84■□□□□ 0.13
FOXN3O00409 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
FOXN3O00409 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.84■□□□□ 0.13
FOXN3O00409 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXN3O00409 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FOXN3O00409 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
FOXN3O00409 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
FOXN3O00409 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXN3O00409 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXN3O00409 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXN3O00409 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXN3O00409 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXN3O00409 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXN3O00409 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.84■□□□□ 0.13
FOXN3O00409 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXN3O00409 MIR4683-201ENST00000579659 81 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms