Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AL137783.1-201ENST00000623494 1896 ntBASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA2E9PIF3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 FNTAP2-201ENST00000430308 634 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 HIST2H2BB-201ENST00000449108 381 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 AP003171.2-201ENST00000528208 925 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 AC020914.3-201ENST00000594712 304 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 AC007663.3-201ENST00000609632 465 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 AC068587.10-201ENST00000641210 219 ntBASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA2E9PIF3 AC018735.1-201ENST00000437208 1502 ntBASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA2E9PIF3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms