Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGA11Q9Y5H2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 DGCR5-201ENST00000399539 862 ntBASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 ACTG1P3-201ENST00000431775 1114 ntBASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 AC007969.1-201ENST00000433675 447 ntBASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 CRB3P1-201ENST00000449338 276 ntBASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 AKR1B10P2-201ENST00000577332 927 ntBASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGA11Q9Y5H2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGA11Q9Y5H2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGA11Q9Y5H2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PCDHGA11Q9Y5H2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.46□□□□□ -0.1
PCDHGA11Q9Y5H2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGA11Q9Y5H2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 TPT1P11-201ENST00000458482 498 ntBASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 AC027307.3-201ENST00000594262 1100 ntBASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGA11Q9Y5H2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms