Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFT52Q9Y366 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFT52Q9Y366 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFT52Q9Y366 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFT52Q9Y366 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
IFT52Q9Y366 INTS4P2-202ENST00000614726 2019 ntBASIC14□□□□□ -0.17
IFT52Q9Y366 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
IFT52Q9Y366 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IFT52Q9Y366 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
IFT52Q9Y366 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFT52Q9Y366 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14□□□□□ -0.17
IFT52Q9Y366 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 AC120045.2-201ENST00000567334 178 ntBASIC13.99□□□□□ -0.17
IFT52Q9Y366 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 AL603764.1-201ENST00000636452 321 ntBASIC13.99□□□□□ -0.17
IFT52Q9Y366 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.99□□□□□ -0.17
IFT52Q9Y366 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFT52Q9Y366 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC152010.1-201ENST00000415779 2006 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AC089987.1-201ENST00000551654 2209 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AL139094.1-201ENST00000405549 1188 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 AL442647.2-201ENST00000429864 857 ntBASIC13.98□□□□□ -0.17
IFT52Q9Y366 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IFT52Q9Y366 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.98□□□□□ -0.17
IFT52Q9Y366 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms