Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 PCDHA5-203ENST00000614258 4248 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 YBX2P1-201ENST00000394192 760 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 IGLL3P-201ENST00000412472 434 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 RPS8P6-201ENST00000426177 609 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 EEF1DP4-201ENST00000446006 880 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 CXCL1P1-201ENST00000502804 216 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AL078644.1-201ENST00000609881 752 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AC010507.1-201ENST00000633895 436 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AC018665.1-201ENST00000622927 1362 ntBASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AC135782.3-201ENST00000562782 2105 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AC023274.1-201ENST00000418278 595 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 UPF3AP3-201ENST00000420996 769 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 KRT18P2-201ENST00000447938 1258 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 OR7E47P-204ENST00000575924 449 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 BX324167.2-201ENST00000623717 3316 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 LILRP1-201ENST00000444199 1370 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AL607033.1-201ENST00000623900 1599 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AC011498.7-201ENST00000624986 2027 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 AL031719.1-201ENST00000623365 2587 ntBASIC14.17□□□□□ -0.14
LRCH1Q9Y2L9 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 297 ms