Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VPS29Q9UBQ0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AC006504.5-208ENST00000588784 2401 ntBASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 FTLP10-202ENST00000505798 471 ntBASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AC138466.3-201ENST00000619983 221 ntBASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AC011840.2-201ENST00000563063 1520 ntBASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS29Q9UBQ0 AL138709.1-201ENST00000614840 1693 ntBASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 AC015688.4-201ENST00000580780 1647 ntBASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 AC098614.1-201ENST00000368528 745 ntBASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS29Q9UBQ0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms