Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 AC087499.5-201ENST00000452760 1342 ntBASIC13.28□□□□□ -0.28
NLKQ9UBE8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 AC100757.3-201ENST00000622361 1406 ntBASIC13.28□□□□□ -0.28
NLKQ9UBE8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NLKQ9UBE8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NLKQ9UBE8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 AC055811.4-201ENST00000624039 1754 ntBASIC13.27□□□□□ -0.28
NLKQ9UBE8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NLKQ9UBE8 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.27□□□□□ -0.28
NLKQ9UBE8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 RPL5P21-201ENST00000404620 815 ntBASIC13.27□□□□□ -0.29
NLKQ9UBE8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 TARDBPP1-201ENST00000442013 1203 ntBASIC13.27□□□□□ -0.29
NLKQ9UBE8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC010336.2-201ENST00000564226 506 ntBASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 PEG13-201ENST00000631594 5667 ntBASIC13.27□□□□□ -0.29
NLKQ9UBE8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.27□□□□□ -0.29
NLKQ9UBE8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NLKQ9UBE8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NLKQ9UBE8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NLKQ9UBE8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms