Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SP110Q9HB58 AP005482.1-201ENST00000563722 1273 ntBASIC15.24■□□□□ 0.03
SP110Q9HB58 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.24■□□□□ 0.03
SP110Q9HB58 MIR6805-201ENST00000615055 62 ntBASIC15.24■□□□□ 0.03
SP110Q9HB58 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.24■□□□□ 0.03
SP110Q9HB58 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SP110Q9HB58 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.24■□□□□ 0.03
SP110Q9HB58 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
SP110Q9HB58 AC092135.3-201ENST00000624151 1846 ntBASIC15.24■□□□□ 0.03
SP110Q9HB58 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SP110Q9HB58 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SP110Q9HB58 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
SP110Q9HB58 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SP110Q9HB58 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.23■□□□□ 0.03
SP110Q9HB58 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.23■□□□□ 0.03
SP110Q9HB58 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 GK-202ENST00000378941 458 ntTSL 3 BASIC15.23■□□□□ 0.03
SP110Q9HB58 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SP110Q9HB58 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 ATP5G2P4-201ENST00000442175 420 ntBASIC15.23■□□□□ 0.03
SP110Q9HB58 KRT223P-202ENST00000449164 1292 ntBASIC15.23■□□□□ 0.03
SP110Q9HB58 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.23■□□□□ 0.03
SP110Q9HB58 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.23■□□□□ 0.03
SP110Q9HB58 AP003171.2-201ENST00000528208 925 ntBASIC15.23■□□□□ 0.03
SP110Q9HB58 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 AC131206.1-201ENST00000538078 1211 ntBASIC15.23■□□□□ 0.03
SP110Q9HB58 RN7SL713P-201ENST00000582127 302 ntBASIC15.23■□□□□ 0.03
SP110Q9HB58 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.23■□□□□ 0.03
SP110Q9HB58 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SP110Q9HB58 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
SP110Q9HB58 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SP110Q9HB58 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.23■□□□□ 0.03
SP110Q9HB58 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.23■□□□□ 0.03
SP110Q9HB58 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SP110Q9HB58 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.22■□□□□ 0.03
SP110Q9HB58 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SP110Q9HB58 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SP110Q9HB58 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.22■□□□□ 0.03
SP110Q9HB58 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 AC004945.1-201ENST00000416738 983 ntBASIC15.22■□□□□ 0.03
SP110Q9HB58 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.22■□□□□ 0.03
SP110Q9HB58 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.22■□□□□ 0.03
SP110Q9HB58 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.22■□□□□ 0.03
SP110Q9HB58 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.22■□□□□ 0.03
SP110Q9HB58 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.22■□□□□ 0.03
SP110Q9HB58 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.22■□□□□ 0.03
SP110Q9HB58 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.22■□□□□ 0.03
SP110Q9HB58 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SP110Q9HB58 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms