Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
EFCC1Q9HA90 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 IGHV3-37-201ENST00000518544 340 ntBASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AC009955.4-201ENST00000597192 544 ntBASIC17.29■□□□□ 0.36
EFCC1Q9HA90 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AP000593.2-201ENST00000542775 1433 ntBASIC17.29■□□□□ 0.36
EFCC1Q9HA90 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 INE2-201ENST00000630399 1874 ntBASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
EFCC1Q9HA90 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 PIN4P1-201ENST00000451079 396 ntBASIC17.28■□□□□ 0.36
EFCC1Q9HA90 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 RBM8B-201ENST00000555532 525 ntBASIC17.28■□□□□ 0.36
EFCC1Q9HA90 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 AC007718.1-201ENST00000621078 280 ntBASIC17.28■□□□□ 0.36
EFCC1Q9HA90 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 AC015656.1-201ENST00000624209 3578 ntBASIC17.28■□□□□ 0.36
EFCC1Q9HA90 AC009093.2-202ENST00000620513 2079 ntBASIC17.28■□□□□ 0.36
EFCC1Q9HA90 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFCC1Q9HA90 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms