Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 AC138466.5-201ENST00000624002 808 ntBASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 MME-218ENST00000625667 363 ntTSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 AC244394.1-201ENST00000435000 1665 ntBASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 AC025262.2-201ENST00000623975 1056 ntBASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.31■□□□□ 0.2
UBE2OQ9C0C9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AC136759.1-202ENST00000530858 2194 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 KRT18P9-201ENST00000604826 1300 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 ACTBP7-201ENST00000418351 1124 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 NDUFS6P1-201ENST00000485187 316 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 PHBP15-201ENST00000574228 665 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 RN7SL470P-201ENST00000583069 259 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 SIGLEC18P-201ENST00000602271 909 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AL157813.1-201ENST00000612996 587 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AL009178.2-201ENST00000597278 2719 ntBASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2OQ9C0C9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms