Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NME2-201ENST00000393183 568 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 HNRNPA1P41-201ENST00000397777 928 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC012497.1-201ENST00000429392 575 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC073150.1-201ENST00000450406 1084 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC091804.1-201ENST00000486888 567 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NUP210P1-202ENST00000504322 710 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC005740.2-201ENST00000511085 419 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 CD164-210ENST00000512821 964 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC134698.3-201ENST00000523880 214 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 DUX4L46-201ENST00000566845 751 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MIR5572-201ENST00000583188 137 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC026740.1-201ENST00000607068 791 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC090164.2-201ENST00000611487 516 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 Z98259.2-201ENST00000641583 609 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC004923.1-202ENST00000642106 209 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 R3HDM2P2-201ENST00000401880 2116 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms