Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HDHD3Q9BSH5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 MIR1233-2-201ENST00000408138 82 ntBASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 MIR1233-1-201ENST00000408722 82 ntBASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 RN7SL399P-201ENST00000471648 279 ntBASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 KRT8P22-201ENST00000562317 1415 ntBASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 SPDYE22P-201ENST00000582158 798 ntBASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 AC130686.1-201ENST00000622936 2466 ntBASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 BX539320.1-201ENST00000623759 877 ntBASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HDHD3Q9BSH5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AC022144.1-201ENST00000602255 1580 ntBASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 RN7SL832P-201ENST00000607781 1756 ntBASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms