Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 AC114271.1-201ENST00000612689 2813 ntBASIC14.5□□□□□ -0.09
EBF4Q9BQW3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.5□□□□□ -0.09
EBF4Q9BQW3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 AL645937.2-201ENST00000396808 931 ntBASIC14.49□□□□□ -0.09
EBF4Q9BQW3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 AL512356.2-201ENST00000546955 174 ntBASIC14.49□□□□□ -0.09
EBF4Q9BQW3 DUX4L47-201ENST00000566374 394 ntBASIC14.49□□□□□ -0.09
EBF4Q9BQW3 AC107373.2-201ENST00000607735 490 ntBASIC14.49□□□□□ -0.09
EBF4Q9BQW3 AL391069.4-201ENST00000609583 481 ntBASIC14.49□□□□□ -0.09
EBF4Q9BQW3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
EBF4Q9BQW3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.48□□□□□ -0.09
EBF4Q9BQW3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
EBF4Q9BQW3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms