Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPAS2Q99743 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.62□□□□□ -0.07
NPAS2Q99743 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NPAS2Q99743 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NPAS2Q99743 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NPAS2Q99743 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 AP006294.1-201ENST00000415407 339 ntBASIC14.61□□□□□ -0.07
NPAS2Q99743 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.61□□□□□ -0.07
NPAS2Q99743 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.61□□□□□ -0.07
NPAS2Q99743 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.61□□□□□ -0.07
NPAS2Q99743 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.61□□□□□ -0.07
NPAS2Q99743 RRP7BP-205ENST00000566851 833 ntBASIC14.61□□□□□ -0.07
NPAS2Q99743 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
NPAS2Q99743 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.61□□□□□ -0.07
NPAS2Q99743 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 AL354702.1-201ENST00000442006 1960 ntBASIC14.61□□□□□ -0.07
NPAS2Q99743 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 CLK3P2-201ENST00000427566 1453 ntBASIC14.61□□□□□ -0.07
NPAS2Q99743 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPAS2Q99743 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NPAS2Q99743 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPAS2Q99743 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
NPAS2Q99743 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
NPAS2Q99743 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 U91328.1-201ENST00000437528 223 ntBASIC14.6□□□□□ -0.07
NPAS2Q99743 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.6□□□□□ -0.07
NPAS2Q99743 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 RN7SL752P-201ENST00000463779 287 ntBASIC14.6□□□□□ -0.07
NPAS2Q99743 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 AC022447.6-201ENST00000515522 438 ntBASIC14.6□□□□□ -0.07
NPAS2Q99743 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.6□□□□□ -0.07
NPAS2Q99743 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.6□□□□□ -0.07
NPAS2Q99743 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.6□□□□□ -0.07
NPAS2Q99743 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 WFDC1-204ENST00000613603 549 ntBASIC14.6□□□□□ -0.07
NPAS2Q99743 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NPAS2Q99743 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.6□□□□□ -0.07
NPAS2Q99743 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms