Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TMED5-201ENST00000370280 750 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CEACAM22P-202ENST00000455058 1021 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 RN7SL22P-201ENST00000471800 269 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AL132994.1-201ENST00000554098 400 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 BICD1-207ENST00000551848 1962 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 DLX4-206ENST00000611342 1662 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 REXO1L4P-201ENST00000605109 1937 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TCAF2P1-201ENST00000291129 2421 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 APH1B-203ENST00000380343 685 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AC136475.6-201ENST00000533113 289 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AC022382.1-201ENST00000602768 336 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AL139384.1-201ENST00000612143 3047 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TRBV22-1-201ENST00000424543 337 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 PFN1P10-201ENST00000455962 327 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AC113398.1-201ENST00000464124 406 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TBC1D3P6-201ENST00000505954 962 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AC095040.1-201ENST00000513286 675 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 FAM90A22P-201ENST00000400142 1395 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TPM3P7-201ENST00000338274 732 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 TTC32-202ENST00000402414 735 ntTSL 5 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 RN7SL292P-201ENST00000473305 266 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 SSPN-207ENST00000540266 587 ntTSL 4 BASIC4.3□□□□□ -1.72
HMCN1Q96RW7 PEBP1P1-201ENST00000554856 510 ntBASIC4.3□□□□□ -1.72
HMCN1Q96RW7 NT5C-204ENST00000578337 582 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms