Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 AC018442.1-201ENST00000421439 2061 ntBASIC13.63□□□□□ -0.23
SNX18Q96RF0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.63□□□□□ -0.23
SNX18Q96RF0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNX18Q96RF0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.62□□□□□ -0.23
SNX18Q96RF0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 AC009407.1-201ENST00000568958 598 ntBASIC13.62□□□□□ -0.23
SNX18Q96RF0 AC036164.1-201ENST00000570544 333 ntBASIC13.62□□□□□ -0.23
SNX18Q96RF0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNX18Q96RF0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SNX18Q96RF0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 AC138969.2-201ENST00000532739 9932 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 AL353779.1-201ENST00000434793 351 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 AC026410.3-201ENST00000514280 936 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 AP005018.1-201ENST00000525475 301 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 RARRES2P5-201ENST00000564013 466 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 SRD5A3P1-201ENST00000603021 949 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.61□□□□□ -0.23
SNX18Q96RF0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNX18Q96RF0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.61□□□□□ -0.23
SNX18Q96RF0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms