Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 SNORA57-201ENST00000383870 149 ntBASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 AP000322.3-201ENST00000608665 388 ntBASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 AL162727.3-201ENST00000635661 2787 ntBASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD1Q96PZ7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC006529.1-201ENST00000459978 637 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC068831.5-201ENST00000557387 328 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC023090.2-201ENST00000625182 2110 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC139713.2-207ENST00000641556 1292 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AL512599.1-201ENST00000430724 685 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC018638.5-201ENST00000450885 754 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC226150.1-201ENST00000544259 466 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 MIEF1-215ENST00000637854 213 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AL360270.3-201ENST00000609118 1348 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 RN7SL121P-201ENST00000584223 273 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 C18orf15-201ENST00000623680 2534 ntBASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD1Q96PZ7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CSMD1Q96PZ7 VENTXP4-201ENST00000449029 958 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms