Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AL512384.1-201ENST00000406683 331 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 COX5BP8-201ENST00000416911 349 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AC007389.4-201ENST00000454674 793 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 CLUHP6-201ENST00000580789 941 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 AC010319.3-201ENST00000597028 470 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 AP005019.2-201ENST00000615104 511 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AC079781.5-202ENST00000641784 3743 ntBASIC14.1□□□□□ -0.15
COL21A1Q96P44 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL21A1Q96P44 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL21A1Q96P44 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 HLA-K-203ENST00000430151 1046 ntBASIC14.09□□□□□ -0.15
COL21A1Q96P44 ACTG1P3-201ENST00000431775 1114 ntBASIC14.09□□□□□ -0.15
COL21A1Q96P44 AC114812.1-204ENST00000449669 728 ntBASIC14.09□□□□□ -0.15
COL21A1Q96P44 KRT17P7-201ENST00000451704 1104 ntBASIC14.09□□□□□ -0.15
COL21A1Q96P44 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 CR383656.12-201ENST00000549567 513 ntBASIC14.09□□□□□ -0.15
COL21A1Q96P44 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 PRSS30P-206ENST00000641773 873 ntBASIC14.09□□□□□ -0.15
COL21A1Q96P44 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL21A1Q96P44 AC018665.1-201ENST00000622927 1362 ntBASIC14.09□□□□□ -0.15
COL21A1Q96P44 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
COL21A1Q96P44 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms