Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TM9SF4Q92544 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TM9SF4Q92544 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AC079178.1-201ENST00000420915 656 ntBASIC14.09□□□□□ -0.15
TM9SF4Q92544 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AL590640.2-201ENST00000457038 527 ntBASIC14.09□□□□□ -0.15
TM9SF4Q92544 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.09□□□□□ -0.15
TM9SF4Q92544 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 SCARNA20.5-201ENST00000516991 142 ntBASIC14.09□□□□□ -0.15
TM9SF4Q92544 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AC104982.3-201ENST00000581995 514 ntBASIC14.09□□□□□ -0.15
TM9SF4Q92544 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 AL603764.1-201ENST00000636452 321 ntBASIC14.09□□□□□ -0.15
TM9SF4Q92544 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TM9SF4Q92544 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TM9SF4Q92544 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.08□□□□□ -0.15
TM9SF4Q92544 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TM9SF4Q92544 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.15
TM9SF4Q92544 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TM9SF4Q92544 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 AC138028.6-201ENST00000616106 1482 ntBASIC14.08□□□□□ -0.16
TM9SF4Q92544 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 AL139094.1-201ENST00000405549 1188 ntBASIC14.08□□□□□ -0.16
TM9SF4Q92544 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 AP006547.1-201ENST00000563435 692 ntBASIC14.08□□□□□ -0.16
TM9SF4Q92544 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 ECM1P1-201ENST00000604092 1279 ntBASIC14.08□□□□□ -0.16
TM9SF4Q92544 AC005695.3-201ENST00000614522 232 ntBASIC14.08□□□□□ -0.16
TM9SF4Q92544 ENPP7P14-201ENST00000621765 1040 ntBASIC14.08□□□□□ -0.16
TM9SF4Q92544 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.08□□□□□ -0.16
TM9SF4Q92544 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TM9SF4Q92544 MYO15B-237ENST00000642007 4893 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms