Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 TPT1P11-201ENST00000458482 498 ntBASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 AC093433.1-201ENST00000458048 571 ntBASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 TP53TG3HP-202ENST00000569755 579 ntBASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 AL354702.1-201ENST00000442006 1960 ntBASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP1Q8TDR0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 LINC01230-201ENST00000625222 3017 ntBASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 AC022137.2-201ENST00000503482 481 ntBASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.08
TRAF3IP1Q8TDR0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms