Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 LINC01230-201ENST00000625222 3017 ntBASIC13.92□□□□□ -0.18
NUP43Q8NFH3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
NUP43Q8NFH3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AC020910.5-201ENST00000623668 1865 ntBASIC13.91□□□□□ -0.18
NUP43Q8NFH3 INE2-201ENST00000630399 1874 ntBASIC13.91□□□□□ -0.18
NUP43Q8NFH3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AC005229.1-201ENST00000392885 409 ntBASIC13.91□□□□□ -0.18
NUP43Q8NFH3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AP005018.1-201ENST00000525475 301 ntBASIC13.91□□□□□ -0.18
NUP43Q8NFH3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AC025279.2-201ENST00000569730 653 ntBASIC13.91□□□□□ -0.18
NUP43Q8NFH3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AC132938.4-201ENST00000623835 848 ntBASIC13.91□□□□□ -0.18
NUP43Q8NFH3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.91□□□□□ -0.18
NUP43Q8NFH3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AL512384.1-201ENST00000406683 331 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 C2orf27AP3-201ENST00000434123 579 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 TTTY23B-201ENST00000442790 549 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 BCRP2-202ENST00000447763 634 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 USP32P1-208ENST00000506594 1164 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 GCOM2-201ENST00000509133 1104 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 BCRP6-201ENST00000510112 632 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 BCRP7-201ENST00000511549 544 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP43Q8NFH3 AC132938.2-201ENST00000579188 680 ntBASIC13.9□□□□□ -0.18
NUP43Q8NFH3 GNRHR2-203ENST00000581100 1187 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms