Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 DGCR9-201ENST00000609630 2415 ntBASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC092580.3-201ENST00000430932 139 ntBASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC004066.1-201ENST00000502488 802 ntBASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC097493.3-201ENST00000509725 367 ntBASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AL590560.3-201ENST00000623350 461 ntBASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 AC018665.1-201ENST00000622927 1362 ntBASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.15□□□□□ -0.3
DNAAF1Q8NEP3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
DNAAF1Q8NEP3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
DNAAF1Q8NEP3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
DNAAF1Q8NEP3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
DNAAF1Q8NEP3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
DNAAF1Q8NEP3 AC012617.1-204ENST00000586340 2305 ntBASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 AC100757.3-201ENST00000622361 1406 ntBASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 MEIS3P1-201ENST00000495167 958 ntBASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DNAAF1Q8NEP3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms