Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIPK4Q8NE63 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIPK4Q8NE63 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIPK4Q8NE63 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 AC004461.1-201ENST00000412461 403 ntBASIC14.52□□□□□ -0.09
HIPK4Q8NE63 MTND6P24-201ENST00000440466 518 ntBASIC14.52□□□□□ -0.09
HIPK4Q8NE63 SPDYE14P-201ENST00000442619 822 ntBASIC14.52□□□□□ -0.09
HIPK4Q8NE63 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 DNAJB3-201ENST00000446806 729 ntBASIC14.52□□□□□ -0.09
HIPK4Q8NE63 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIPK4Q8NE63 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 FAM90A12P-201ENST00000519497 2375 ntBASIC14.51□□□□□ -0.09
HIPK4Q8NE63 FAM90A24P-201ENST00000520792 2369 ntBASIC14.51□□□□□ -0.09
HIPK4Q8NE63 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 GPS2P2-201ENST00000430745 888 ntBASIC14.51□□□□□ -0.09
HIPK4Q8NE63 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 YBX1P5-201ENST00000509441 847 ntBASIC14.51□□□□□ -0.09
HIPK4Q8NE63 SLED1-202ENST00000512051 380 ntBASIC14.51□□□□□ -0.09
HIPK4Q8NE63 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 AC093520.2-201ENST00000561830 333 ntBASIC14.51□□□□□ -0.09
HIPK4Q8NE63 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIPK4Q8NE63 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AL118506.1-201ENST00000601296 3082 ntBASIC14.5□□□□□ -0.09
HIPK4Q8NE63 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 PCDHA5-203ENST00000614258 4248 ntBASIC14.5□□□□□ -0.09
HIPK4Q8NE63 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms