Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 AC126755.1-201ENST00000525846 6405 ntBASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAM1L1Q8N609 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 FAM86MP-201ENST00000340703 885 ntBASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 TUBB8P8-201ENST00000458717 1058 ntBASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 AL023803.2-201ENST00000620080 638 ntBASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 AC244394.1-201ENST00000435000 1665 ntBASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 LINC02228-204ENST00000642115 2962 ntBASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAM1L1Q8N609 KRT8P29-201ENST00000420409 1371 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 MYADML-201ENST00000474610 2147 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC106881.1-201ENST00000605849 3329 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC006504.5-208ENST00000588784 2401 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC108725.1-201ENST00000495472 409 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 AC005730.2-201ENST00000564549 1184 ntBASIC14.6□□□□□ -0.07
TRAM1L1Q8N609 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms