Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AC139749.1-202ENST00000617529 3139 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 INTS4P1-203ENST00000641008 3683 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AL354702.1-201ENST00000442006 1960 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 RN7SL837P-201ENST00000463010 287 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 MESTP3-201ENST00000503460 968 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 MIR3197-201ENST00000582241 73 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AL138725.1-201ENST00000407347 1314 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 AC007191.1-201ENST00000623179 2995 ntBASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TTC9CQ8N5M4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TTC9CQ8N5M4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TTC9CQ8N5M4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms