Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 AC105233.2-201ENST00000523697 349 ntBASIC11.26□□□□□ -0.61
MRPL54Q6P161 AF228730.5-201ENST00000530288 346 ntBASIC11.26□□□□□ -0.61
MRPL54Q6P161 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 AL138918.1-201ENST00000568306 659 ntBASIC11.26□□□□□ -0.61
MRPL54Q6P161 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 AC073389.1-201ENST00000595595 795 ntBASIC11.26□□□□□ -0.61
MRPL54Q6P161 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 AP002414.3-201ENST00000589352 1468 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 FOXO1B-201ENST00000504678 1527 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 MAPK10-262ENST00000641051 5738 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 AC140658.5-201ENST00000438532 169 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 PRSS29P-201ENST00000440800 595 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 AC105339.3-201ENST00000560043 636 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CLEC4GP1-201ENST00000596555 870 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 AC008735.5-201ENST00000623544 497 ntBASIC11.25□□□□□ -0.61
MRPL54Q6P161 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL54Q6P161 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL54Q6P161 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms