Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC022616.1-201ENST00000518688 554 ntBASIC15.63■□□□□ 0.09
RNF43Q68DV7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF43Q68DV7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF43Q68DV7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 LINC01230-201ENST00000625222 3017 ntBASIC15.62■□□□□ 0.09
RNF43Q68DV7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 MIR326-201ENST00000362220 95 ntBASIC15.62■□□□□ 0.09
RNF43Q68DV7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AC079328.1-201ENST00000560358 952 ntBASIC15.62■□□□□ 0.09
RNF43Q68DV7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 REXO1L4P-201ENST00000605109 1937 ntBASIC15.62■□□□□ 0.09
RNF43Q68DV7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF43Q68DV7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF43Q68DV7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 AC126755.1-201ENST00000525846 6405 ntBASIC15.61■□□□□ 0.09
RNF43Q68DV7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RNF43Q68DV7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF43Q68DV7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms