Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MIR4259-201ENST00000584466 101 ntBASIC13.29□□□□□ -0.28
H3F3AP84243 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.29□□□□□ -0.28
H3F3AP84243 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3AP84243 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3AP84243 LINC00552-201ENST00000625151 2579 ntBASIC13.29□□□□□ -0.28
H3F3AP84243 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3AP84243 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3AP84243 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3AP84243 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
H3F3AP84243 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H3F3AP84243 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 HLA-V-201ENST00000429037 534 ntBASIC13.28□□□□□ -0.28
H3F3AP84243 AL355994.2-201ENST00000447882 704 ntBASIC13.28□□□□□ -0.28
H3F3AP84243 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.28□□□□□ -0.28
H3F3AP84243 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.28□□□□□ -0.28
H3F3AP84243 AC008825.2-201ENST00000603374 718 ntBASIC13.28□□□□□ -0.28
H3F3AP84243 AC133552.6-201ENST00000613406 534 ntBASIC13.28□□□□□ -0.28
H3F3AP84243 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 CICP4-201ENST00000447359 2812 ntBASIC13.28□□□□□ -0.28
H3F3AP84243 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3AP84243 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H3F3AP84243 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3AP84243 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
H3F3AP84243 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.27□□□□□ -0.28
H3F3AP84243 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.27□□□□□ -0.28
H3F3AP84243 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
H3F3AP84243 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 MYO15B-237ENST00000642007 4893 ntBASIC13.27□□□□□ -0.28
H3F3AP84243 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 AGGF1P1-201ENST00000509500 2073 ntBASIC13.27□□□□□ -0.28
H3F3AP84243 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
H3F3AP84243 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
H3F3AP84243 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3AP84243 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.27□□□□□ -0.28
H3F3AP84243 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 GK-202ENST00000378941 458 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3AP84243 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H3F3AP84243 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms