Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.04□□□□□ -0.16
RAE1P78406 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.04□□□□□ -0.16
RAE1P78406 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RAE1P78406 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 HSPA8P5-201ENST00000456928 2069 ntBASIC14.03□□□□□ -0.16
RAE1P78406 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.03□□□□□ -0.16
RAE1P78406 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.03□□□□□ -0.16
RAE1P78406 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAE1P78406 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAE1P78406 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
RAE1P78406 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.03□□□□□ -0.16
RAE1P78406 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 C2orf27AP3-201ENST00000434123 579 ntBASIC14.03□□□□□ -0.16
RAE1P78406 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.03□□□□□ -0.16
RAE1P78406 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.03□□□□□ -0.16
RAE1P78406 SORD2P-201ENST00000558556 1069 ntBASIC14.03□□□□□ -0.16
RAE1P78406 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.03□□□□□ -0.16
RAE1P78406 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.03□□□□□ -0.16
RAE1P78406 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 AC073413.1-201ENST00000603927 732 ntBASIC14.03□□□□□ -0.16
RAE1P78406 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.03□□□□□ -0.16
RAE1P78406 AL022328.1-201ENST00000610050 478 ntBASIC14.03□□□□□ -0.16
RAE1P78406 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 AL354718.3-201ENST00000616414 581 ntBASIC14.03□□□□□ -0.16
RAE1P78406 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 CR382287.1-201ENST00000623954 586 ntBASIC14.03□□□□□ -0.16
RAE1P78406 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAE1P78406 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.03□□□□□ -0.16
RAE1P78406 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAE1P78406 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RAE1P78406 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RAE1P78406 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.02□□□□□ -0.16
RAE1P78406 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RAE1P78406 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RAE1P78406 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RAE1P78406 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.02□□□□□ -0.16
RAE1P78406 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAE1P78406 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
RAE1P78406 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 KRT8P28-201ENST00000433288 1390 ntBASIC14.02□□□□□ -0.17
RAE1P78406 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAE1P78406 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAE1P78406 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 COX5BP8-201ENST00000416911 349 ntBASIC14.02□□□□□ -0.17
RAE1P78406 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.02□□□□□ -0.17
RAE1P78406 AC016694.1-201ENST00000434179 700 ntBASIC14.02□□□□□ -0.17
RAE1P78406 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAE1P78406 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.02□□□□□ -0.17
RAE1P78406 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.02□□□□□ -0.17
RAE1P78406 KRT90P-201ENST00000549264 1064 ntBASIC14.02□□□□□ -0.17
RAE1P78406 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.02□□□□□ -0.17
RAE1P78406 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms