Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKN2DP55273 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDKN2DP55273 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKN2DP55273 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 TPM3P8-201ENST00000330554 643 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 AC005229.1-201ENST00000392885 409 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 AC092933.1-201ENST00000393644 945 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 RN7SKP175-201ENST00000408472 289 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
CDKN2DP55273 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 AL355864.2-201ENST00000447420 863 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 BCRP2-202ENST00000447763 634 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 AC007389.4-201ENST00000454674 793 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 INE1-201ENST00000456273 945 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 BCRP6-201ENST00000510112 632 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 BCRP7-201ENST00000511549 544 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.64□□□□□ -0.07
CDKN2DP55273 AP003171.2-201ENST00000528208 925 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 SLC25A47P1-201ENST00000531577 414 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.64□□□□□ -0.07
CDKN2DP55273 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDKN2DP55273 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDKN2DP55273 AC106820.3-201ENST00000561653 397 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.64□□□□□ -0.07
CDKN2DP55273 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 BX088702.1-201ENST00000610784 235 ntBASIC14.64□□□□□ -0.07
CDKN2DP55273 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDKN2DP55273 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDKN2DP55273 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2DP55273 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.64□□□□□ -0.07
CDKN2DP55273 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2DP55273 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKN2DP55273 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CDKN2DP55273 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2DP55273 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKN2DP55273 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKN2DP55273 RN7SL692P-201ENST00000464677 288 ntBASIC14.63□□□□□ -0.07
CDKN2DP55273 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKN2DP55273 AC011495.1-201ENST00000498085 584 ntBASIC14.63□□□□□ -0.07
CDKN2DP55273 AP005018.1-201ENST00000525475 301 ntBASIC14.63□□□□□ -0.07
CDKN2DP55273 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.63□□□□□ -0.07
CDKN2DP55273 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKN2DP55273 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 AC132938.2-201ENST00000579188 680 ntBASIC14.63□□□□□ -0.07
CDKN2DP55273 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.63□□□□□ -0.07
CDKN2DP55273 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDKN2DP55273 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDKN2DP55273 AC008735.3-201ENST00000596646 500 ntBASIC14.63□□□□□ -0.07
CDKN2DP55273 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms