Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
NR1H2P55055 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NR1H2P55055 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NR1H2P55055 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NR1H2P55055 AC068760.1-201ENST00000493579 1953 ntBASIC14.18□□□□□ -0.14
NR1H2P55055 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NR1H2P55055 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H2P55055 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 GK-202ENST00000378941 458 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H2P55055 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H2P55055 MTND6P24-201ENST00000440466 518 ntBASIC14.18□□□□□ -0.14
NR1H2P55055 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H2P55055 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.18□□□□□ -0.14
NR1H2P55055 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.18□□□□□ -0.14
NR1H2P55055 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H2P55055 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.18□□□□□ -0.14
NR1H2P55055 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 AC243562.2-201ENST00000561247 970 ntBASIC14.18□□□□□ -0.14
NR1H2P55055 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NR1H2P55055 AC026979.3-201ENST00000607315 403 ntBASIC14.18□□□□□ -0.14
NR1H2P55055 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 AL589739.1-201ENST00000607720 493 ntBASIC14.18□□□□□ -0.14
NR1H2P55055 FOXO1B-201ENST00000504678 1527 ntBASIC14.18□□□□□ -0.14
NR1H2P55055 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NR1H2P55055 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NR1H2P55055 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.18□□□□□ -0.14
NR1H2P55055 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR1H2P55055 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.18□□□□□ -0.14
NR1H2P55055 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 AL031595.1-201ENST00000623969 4709 ntBASIC14.17□□□□□ -0.14
NR1H2P55055 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 PIN1P1-201ENST00000412108 996 ntBASIC14.17□□□□□ -0.14
NR1H2P55055 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.17□□□□□ -0.14
NR1H2P55055 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 AC005225.4-201ENST00000557330 545 ntBASIC14.17□□□□□ -0.14
NR1H2P55055 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.17□□□□□ -0.14
NR1H2P55055 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.17□□□□□ -0.14
NR1H2P55055 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR1H2P55055 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms