Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 TPM3P8-201ENST00000330554 643 ntBASIC13.89□□□□□ -0.19
PSMD4P55036 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PSMD4P55036 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.89□□□□□ -0.19
PSMD4P55036 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.89□□□□□ -0.19
PSMD4P55036 AC132938.2-201ENST00000579188 680 ntBASIC13.89□□□□□ -0.19
PSMD4P55036 AC008735.3-201ENST00000596646 500 ntBASIC13.89□□□□□ -0.19
PSMD4P55036 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 ENPP7P14-201ENST00000621765 1040 ntBASIC13.89□□□□□ -0.19
PSMD4P55036 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.89□□□□□ -0.19
PSMD4P55036 AL591163.1-201ENST00000641757 987 ntBASIC13.89□□□□□ -0.19
PSMD4P55036 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 AC106881.1-201ENST00000605849 3329 ntBASIC13.89□□□□□ -0.19
PSMD4P55036 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 MSTO2P-201ENST00000314835 1709 ntBASIC13.89□□□□□ -0.19
PSMD4P55036 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.89□□□□□ -0.19
PSMD4P55036 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PSMD4P55036 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.89□□□□□ -0.19
PSMD4P55036 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PSMD4P55036 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PSMD4P55036 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PSMD4P55036 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PSMD4P55036 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.88□□□□□ -0.19
PSMD4P55036 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PSMD4P55036 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.88□□□□□ -0.19
PSMD4P55036 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.88□□□□□ -0.19
PSMD4P55036 AC016694.1-201ENST00000434179 700 ntBASIC13.88□□□□□ -0.19
PSMD4P55036 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PSMD4P55036 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.88□□□□□ -0.19
PSMD4P55036 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PSMD4P55036 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.88□□□□□ -0.19
PSMD4P55036 USP32P1-208ENST00000506594 1164 ntBASIC13.88□□□□□ -0.19
PSMD4P55036 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.88□□□□□ -0.19
PSMD4P55036 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.88□□□□□ -0.19
PSMD4P55036 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.88□□□□□ -0.19
PSMD4P55036 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 RPSAP52-203ENST00000622976 1023 ntBASIC13.88□□□□□ -0.19
PSMD4P55036 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 AL031595.1-201ENST00000623969 4709 ntBASIC13.88□□□□□ -0.19
PSMD4P55036 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.88□□□□□ -0.19
PSMD4P55036 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.88□□□□□ -0.19
PSMD4P55036 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PSMD4P55036 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PSMD4P55036 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms