Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.97□□□□□ -0.33
ATP1B3P54709 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
ATP1B3P54709 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.97□□□□□ -0.33
ATP1B3P54709 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 RRP7BP-205ENST00000566851 833 ntBASIC12.97□□□□□ -0.33
ATP1B3P54709 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.97□□□□□ -0.33
ATP1B3P54709 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.97□□□□□ -0.33
ATP1B3P54709 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.97□□□□□ -0.33
ATP1B3P54709 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.97□□□□□ -0.33
ATP1B3P54709 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.97□□□□□ -0.33
ATP1B3P54709 BX539320.1-201ENST00000623759 877 ntBASIC12.97□□□□□ -0.33
ATP1B3P54709 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATP1B3P54709 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.97□□□□□ -0.33
ATP1B3P54709 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ATP1B3P54709 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ATP1B3P54709 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.96□□□□□ -0.33
ATP1B3P54709 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 SPDYE19P-201ENST00000338590 713 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC134915.1-201ENST00000426461 574 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 HLA-K-203ENST00000430151 1046 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC093214.1-201ENST00000511688 1107 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.96□□□□□ -0.33
ATP1B3P54709 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC023310.3-201ENST00000557027 670 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 AC100756.1-201ENST00000562736 682 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 AC138749.3-201ENST00000567691 622 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ATP1B3P54709 AL390955.2-201ENST00000603032 514 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 AC116165.1-201ENST00000611806 668 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 AC106028.4-201ENST00000614509 607 ntBASIC12.96□□□□□ -0.33
ATP1B3P54709 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ATP1B3P54709 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ATP1B3P54709 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ATP1B3P54709 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATP1B3P54709 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATP1B3P54709 AC152010.1-201ENST00000415779 2006 ntBASIC12.96□□□□□ -0.34
ATP1B3P54709 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.96□□□□□ -0.34
ATP1B3P54709 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATP1B3P54709 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.96□□□□□ -0.34
ATP1B3P54709 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATP1B3P54709 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATP1B3P54709 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATP1B3P54709 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.96□□□□□ -0.34
ATP1B3P54709 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms