Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 AL162726.2-201ENST00000438986 1017 ntBASIC13.2□□□□□ -0.3
SLC25A1P53007 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 RFPL4AP1-201ENST00000530883 850 ntBASIC13.2□□□□□ -0.3
SLC25A1P53007 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 BX088702.1-201ENST00000610784 235 ntBASIC13.2□□□□□ -0.3
SLC25A1P53007 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 AC139712.1-201ENST00000378256 1875 ntBASIC13.2□□□□□ -0.3
SLC25A1P53007 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SLC25A1P53007 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SLC25A1P53007 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.2□□□□□ -0.3
SLC25A1P53007 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SLC25A1P53007 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SLC25A1P53007 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 AC245100.3-201ENST00000441281 285 ntBASIC13.19□□□□□ -0.3
SLC25A1P53007 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 AC009486.1-201ENST00000569860 813 ntBASIC13.19□□□□□ -0.3
SLC25A1P53007 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
SLC25A1P53007 AL132655.2-201ENST00000596276 594 ntBASIC13.19□□□□□ -0.3
SLC25A1P53007 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SLC25A1P53007 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 KHSRPP1-201ENST00000427983 1768 ntBASIC13.19□□□□□ -0.3
SLC25A1P53007 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SLC25A1P53007 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.19□□□□□ -0.3
SLC25A1P53007 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SLC25A1P53007 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.18□□□□□ -0.3
SLC25A1P53007 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 AC011498.7-201ENST00000624986 2027 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SLC25A1P53007 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC25A1P53007 CLUHP2-201ENST00000426660 1303 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 AC007541.1-201ENST00000570282 1469 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms