Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A3P43003 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 AL359881.3-201ENST00000602640 1721 ntBASIC13.71□□□□□ -0.21
SLC1A3P43003 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SLC1A3P43003 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A3P43003 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A3P43003 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A3P43003 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.71□□□□□ -0.21
SLC1A3P43003 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC1A3P43003 PTP4A1P2-201ENST00000546033 454 ntBASIC13.71□□□□□ -0.21
SLC1A3P43003 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SLC1A3P43003 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SLC1A3P43003 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
SLC1A3P43003 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.71□□□□□ -0.21
SLC1A3P43003 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A3P43003 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.71□□□□□ -0.21
SLC1A3P43003 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SLC1A3P43003 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SLC1A3P43003 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A3P43003 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A3P43003 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
SLC1A3P43003 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A3P43003 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.71□□□□□ -0.22
SLC1A3P43003 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A3P43003 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A3P43003 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.71□□□□□ -0.22
SLC1A3P43003 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SLC1A3P43003 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.7□□□□□ -0.22
SLC1A3P43003 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 BAATP1-201ENST00000412284 1225 ntBASIC13.7□□□□□ -0.22
SLC1A3P43003 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 AC011495.1-201ENST00000498085 584 ntBASIC13.7□□□□□ -0.22
SLC1A3P43003 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.7□□□□□ -0.22
SLC1A3P43003 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 AC025048.6-201ENST00000634326 1161 ntBASIC13.7□□□□□ -0.22
SLC1A3P43003 AL358472.5-202ENST00000641448 1267 ntBASIC13.7□□□□□ -0.22
SLC1A3P43003 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLC1A3P43003 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SLC1A3P43003 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLC1A3P43003 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms