Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA3P32297 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.71■□□□□ 0.1
CHRNA3P32297 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHRNA3P32297 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHRNA3P32297 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 AL137783.1-201ENST00000623494 1896 ntBASIC15.7■□□□□ 0.1
CHRNA3P32297 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.7■□□□□ 0.1
CHRNA3P32297 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 AC079776.1-201ENST00000401540 1152 ntBASIC15.7■□□□□ 0.1
CHRNA3P32297 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.7■□□□□ 0.1
CHRNA3P32297 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 MIR5189-201ENST00000577370 114 ntBASIC15.7■□□□□ 0.1
CHRNA3P32297 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 BTNL10-201ENST00000595971 695 ntBASIC15.7■□□□□ 0.1
CHRNA3P32297 AC093813.1-201ENST00000605066 256 ntBASIC15.7■□□□□ 0.1
CHRNA3P32297 AC107373.2-201ENST00000607735 490 ntBASIC15.7■□□□□ 0.1
CHRNA3P32297 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 ST20-AS1-201ENST00000560255 4223 ntBASIC15.7■□□□□ 0.1
CHRNA3P32297 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHRNA3P32297 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CHRNA3P32297 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.7■□□□□ 0.1
CHRNA3P32297 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 HLA-K-203ENST00000430151 1046 ntBASIC15.69■□□□□ 0.1
CHRNA3P32297 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA3P32297 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA3P32297 ATP5G2P4-201ENST00000442175 420 ntBASIC15.69■□□□□ 0.1
CHRNA3P32297 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA3P32297 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA3P32297 ACA64.2-201ENST00000459014 129 ntBASIC15.69■□□□□ 0.1
CHRNA3P32297 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 IGHV3-71-201ENST00000523324 359 ntBASIC15.69■□□□□ 0.1
CHRNA3P32297 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 SLC25A47P1-201ENST00000531577 414 ntBASIC15.69■□□□□ 0.1
CHRNA3P32297 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA3P32297 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.69■□□□□ 0.1
CHRNA3P32297 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 CLUHP6-201ENST00000580789 941 ntBASIC15.69■□□□□ 0.1
CHRNA3P32297 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms