Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A4P31645 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC6A4P31645 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A4P31645 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A4P31645 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A4P31645 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A4P31645 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A4P31645 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A4P31645 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC6A4P31645 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A4P31645 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A4P31645 AC015688.4-201ENST00000580780 1647 ntBASIC15.17■□□□□ 0.02
SLC6A4P31645 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A4P31645 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A4P31645 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A4P31645 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SLC6A4P31645 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A4P31645 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A4P31645 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A4P31645 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 AC138028.6-201ENST00000616106 1482 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC6A4P31645 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SLC6A4P31645 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC6A4P31645 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC6A4P31645 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 FAM58BP-201ENST00000439056 645 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 AC012441.2-201ENST00000444843 739 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC6A4P31645 AC005740.2-201ENST00000511085 419 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC6A4P31645 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
SLC6A4P31645 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SLC6A4P31645 AL160314.3-201ENST00000556041 767 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 RN7SL163P-201ENST00000583100 276 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 AC020914.3-201ENST00000594712 304 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC6A4P31645 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 AC136759.1-202ENST00000530858 2194 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 TMBIM7P-202ENST00000641474 1516 ntBASIC15.16■□□□□ 0.02
SLC6A4P31645 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A4P31645 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A4P31645 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A4P31645 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A4P31645 AC023824.1-201ENST00000562945 2975 ntBASIC15.15■□□□□ 0.02
SLC6A4P31645 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC6A4P31645 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC6A4P31645 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC6A4P31645 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC6A4P31645 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms