Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.25□□□□□ -0.29
HOXC12P31275 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 MIR663B-201ENST00000408361 115 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 FAM197Y7-201ENST00000432892 766 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.25□□□□□ -0.29
HOXC12P31275 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.25□□□□□ -0.29
HOXC12P31275 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.25□□□□□ -0.29
HOXC12P31275 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.25□□□□□ -0.29
HOXC12P31275 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.25□□□□□ -0.29
HOXC12P31275 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 ECM1P1-201ENST00000604092 1279 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 MIR6727-201ENST00000620702 65 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 AC126335.2-201ENST00000623362 4637 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 AL109954.1-202ENST00000564051 2148 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.25□□□□□ -0.29
HOXC12P31275 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HOXC12P31275 AL137783.1-201ENST00000623494 1896 ntBASIC13.25□□□□□ -0.29
HOXC12P31275 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.25□□□□□ -0.29
HOXC12P31275 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 AL138709.1-201ENST00000614840 1693 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 AC138028.6-201ENST00000616106 1482 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 LILRP1-201ENST00000444199 1370 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 AHCYP2-201ENST00000430630 1300 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.24□□□□□ -0.29
HOXC12P31275 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HOXC12P31275 BTBD6P1-201ENST00000412176 1267 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.24□□□□□ -0.29
HOXC12P31275 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.24□□□□□ -0.29
HOXC12P31275 HLA-K-203ENST00000430151 1046 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 AC004898.1-201ENST00000451057 766 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 AL591846.1-201ENST00000451736 433 ntBASIC13.24□□□□□ -0.29
HOXC12P31275 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.24□□□□□ -0.29
HOXC12P31275 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.24□□□□□ -0.29
HOXC12P31275 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.24□□□□□ -0.29
HOXC12P31275 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.24□□□□□ -0.29
HOXC12P31275 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.24□□□□□ -0.29
HOXC12P31275 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.24□□□□□ -0.29
HOXC12P31275 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HOXC12P31275 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms