Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ACTG1P19-201ENST00000418987 1116 ntBASIC18.02■□□□□ 0.48
TM4SF1P30408 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.02■□□□□ 0.48
TM4SF1P30408 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.02■□□□□ 0.48
TM4SF1P30408 AC244197.1-201ENST00000456494 951 ntBASIC18.02■□□□□ 0.48
TM4SF1P30408 RN7SL582P-201ENST00000491078 279 ntBASIC18.02■□□□□ 0.48
TM4SF1P30408 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 AC106047.2-201ENST00000511723 743 ntBASIC18.02■□□□□ 0.48
TM4SF1P30408 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.02■□□□□ 0.48
TM4SF1P30408 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.02■□□□□ 0.48
TM4SF1P30408 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TM4SF1P30408 TREHP1-201ENST00000531328 465 ntBASIC18.02■□□□□ 0.48
TM4SF1P30408 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TM4SF1P30408 PEBP1P2-201ENST00000603980 558 ntBASIC18.02■□□□□ 0.48
TM4SF1P30408 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.02■□□□□ 0.48
TM4SF1P30408 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.02■□□□□ 0.48
TM4SF1P30408 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TM4SF1P30408 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF1P30408 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM4SF1P30408 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.02■□□□□ 0.47
TM4SF1P30408 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.02■□□□□ 0.47
TM4SF1P30408 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TM4SF1P30408 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 PPP1R2P4-201ENST00000424051 595 ntBASIC18.01■□□□□ 0.47
TM4SF1P30408 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TM4SF1P30408 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.01■□□□□ 0.47
TM4SF1P30408 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.01■□□□□ 0.47
TM4SF1P30408 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.01■□□□□ 0.47
TM4SF1P30408 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.01■□□□□ 0.47
TM4SF1P30408 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.01■□□□□ 0.47
TM4SF1P30408 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.01■□□□□ 0.47
TM4SF1P30408 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.01■□□□□ 0.47
TM4SF1P30408 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 DGAT2L7P-201ENST00000602462 744 ntBASIC18.01■□□□□ 0.47
TM4SF1P30408 AC021016.3-201ENST00000608367 477 ntBASIC18.01■□□□□ 0.47
TM4SF1P30408 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TM4SF1P30408 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 AC015688.4-201ENST00000580780 1647 ntBASIC18.01■□□□□ 0.47
TM4SF1P30408 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.01■□□□□ 0.47
TM4SF1P30408 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM4SF1P30408 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TM4SF1P30408 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF1P30408 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF1P30408 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18■□□□□ 0.47
TM4SF1P30408 AC138035.3-201ENST00000622706 2791 ntBASIC18■□□□□ 0.47
TM4SF1P30408 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF1P30408 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF1P30408 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF1P30408 KRT18P46-201ENST00000435568 1279 ntBASIC18■□□□□ 0.47
TM4SF1P30408 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18■□□□□ 0.47
TM4SF1P30408 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18■□□□□ 0.47
TM4SF1P30408 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18■□□□□ 0.47
TM4SF1P30408 AC010632.2-201ENST00000588369 1224 ntBASIC18■□□□□ 0.47
TM4SF1P30408 CYP4F36P-201ENST00000589193 186 ntBASIC18■□□□□ 0.47
TM4SF1P30408 HMGB1P24-201ENST00000611897 328 ntBASIC18■□□□□ 0.47
TM4SF1P30408 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 FUCA1P1-201ENST00000374476 1351 ntBASIC18■□□□□ 0.47
TM4SF1P30408 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TM4SF1P30408 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18■□□□□ 0.47
TM4SF1P30408 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
TM4SF1P30408 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms