Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.86■□□□□ 0.61
RXRBP28702 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RXRBP28702 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 PRORSD1P-202ENST00000563365 2154 ntBASIC18.85■□□□□ 0.61
RXRBP28702 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.85■□□□□ 0.61
RXRBP28702 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 RHOC-205ENST00000369636 786 ntTSL 2 BASIC18.85■□□□□ 0.61
RXRBP28702 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RXRBP28702 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC18.85■□□□□ 0.61
RXRBP28702 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC18.85■□□□□ 0.61
RXRBP28702 GYG1-209ENST00000483267 801 ntTSL 2 BASIC18.85■□□□□ 0.61
RXRBP28702 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.85■□□□□ 0.61
RXRBP28702 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.85■□□□□ 0.61
RXRBP28702 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC18.85■□□□□ 0.61
RXRBP28702 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RXRBP28702 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 PRR20FP-201ENST00000603320 180 ntBASIC18.85■□□□□ 0.61
RXRBP28702 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RXRBP28702 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RXRBP28702 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.85■□□□□ 0.61
RXRBP28702 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RXRBP28702 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.84■□□□□ 0.61
RXRBP28702 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.84■□□□□ 0.61
RXRBP28702 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC18.84■□□□□ 0.61
RXRBP28702 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 TUBB2BP1-201ENST00000404155 871 ntBASIC18.84■□□□□ 0.61
RXRBP28702 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.84■□□□□ 0.61
RXRBP28702 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 AC069421.1-201ENST00000447462 323 ntBASIC18.84■□□□□ 0.61
RXRBP28702 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RXRBP28702 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.84■□□□□ 0.61
RXRBP28702 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC18.84■□□□□ 0.61
RXRBP28702 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC18.84■□□□□ 0.61
RXRBP28702 AC113385.2-201ENST00000614465 762 ntBASIC18.84■□□□□ 0.61
RXRBP28702 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC18.84■□□□□ 0.61
RXRBP28702 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.84■□□□□ 0.61
RXRBP28702 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RXRBP28702 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RXRBP28702 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.84■□□□□ 0.61
RXRBP28702 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RXRBP28702 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RXRBP28702 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RXRBP28702 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RXRBP28702 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RXRBP28702 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC18.83■□□□□ 0.61
RXRBP28702 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms