Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 SHC1P1-201ENST00000425230 1745 ntBASIC17.21■□□□□ 0.35
ERCC3P19447 AC011840.2-201ENST00000563063 1520 ntBASIC17.21■□□□□ 0.34
ERCC3P19447 AL365209.1-201ENST00000624418 6473 ntBASIC17.21■□□□□ 0.34
ERCC3P19447 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ERCC3P19447 E2F3P2-201ENST00000447755 1422 ntBASIC17.21■□□□□ 0.34
ERCC3P19447 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
ERCC3P19447 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
ERCC3P19447 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ERCC3P19447 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ERCC3P19447 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC3P19447 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 FXNP2-201ENST00000411625 547 ntBASIC17.2■□□□□ 0.34
ERCC3P19447 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.2■□□□□ 0.34
ERCC3P19447 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC3P19447 MARK2P5-201ENST00000507649 634 ntBASIC17.2■□□□□ 0.34
ERCC3P19447 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.2■□□□□ 0.34
ERCC3P19447 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.2■□□□□ 0.34
ERCC3P19447 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.2■□□□□ 0.34
ERCC3P19447 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 MIR4706-201ENST00000582134 82 ntBASIC17.2■□□□□ 0.34
ERCC3P19447 AL805961.1-203ENST00000641078 1258 ntBASIC17.2■□□□□ 0.34
ERCC3P19447 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
ERCC3P19447 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.2■□□□□ 0.34
ERCC3P19447 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.2■□□□□ 0.34
ERCC3P19447 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ERCC3P19447 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ERCC3P19447 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ERCC3P19447 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC3P19447 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC3P19447 AC012618.1-201ENST00000461223 412 ntBASIC17.19■□□□□ 0.34
ERCC3P19447 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.19■□□□□ 0.34
ERCC3P19447 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.19■□□□□ 0.34
ERCC3P19447 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.19■□□□□ 0.34
ERCC3P19447 DUX4L46-201ENST00000566845 751 ntBASIC17.19■□□□□ 0.34
ERCC3P19447 MIR3907-201ENST00000579424 151 ntBASIC17.19■□□□□ 0.34
ERCC3P19447 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC3P19447 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC3P19447 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.19■□□□□ 0.34
ERCC3P19447 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
ERCC3P19447 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ERCC3P19447 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
ERCC3P19447 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ERCC3P19447 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.18■□□□□ 0.34
ERCC3P19447 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ERCC3P19447 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms