Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATF3P18847 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF3P18847 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.96■□□□□ 0.79
ATF3P18847 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 CTSL-202ENST00000342020 933 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC19.95■□□□□ 0.78
ATF3P18847 RN7SL288P-201ENST00000490496 291 ntBASIC19.95■□□□□ 0.78
ATF3P18847 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 VENTXP3-201ENST00000546480 773 ntBASIC19.95■□□□□ 0.78
ATF3P18847 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 SNORD3B-1-201ENST00000577988 758 ntBASIC19.95■□□□□ 0.78
ATF3P18847 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 APOC1-209ENST00000592885 562 ntTSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ATF3P18847 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
ATF3P18847 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.95■□□□□ 0.78
ATF3P18847 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF3P18847 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.94■□□□□ 0.78
ATF3P18847 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC19.94■□□□□ 0.78
ATF3P18847 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ATF3P18847 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF3P18847 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF3P18847 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ATF3P18847 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ATF3P18847 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC19.94■□□□□ 0.78
ATF3P18847 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC19.94■□□□□ 0.78
ATF3P18847 RN7SL375P-201ENST00000492442 298 ntBASIC19.94■□□□□ 0.78
ATF3P18847 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC19.94■□□□□ 0.78
ATF3P18847 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
ATF3P18847 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF3P18847 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.94■□□□□ 0.78
ATF3P18847 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
ATF3P18847 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC19.94■□□□□ 0.78
ATF3P18847 AC090386.2-201ENST00000623010 1039 ntBASIC19.94■□□□□ 0.78
ATF3P18847 AC233280.19-201ENST00000633223 136 ntBASIC19.94■□□□□ 0.78
ATF3P18847 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC19.94■□□□□ 0.78
ATF3P18847 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF3P18847 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ATF3P18847 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF3P18847 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
ATF3P18847 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF3P18847 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATF3P18847 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.93■□□□□ 0.78
ATF3P18847 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF3P18847 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 LINC01101-201ENST00000622953 1884 ntBASIC19.93■□□□□ 0.78
ATF3P18847 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 ASS1P2-201ENST00000439895 1223 ntBASIC19.93■□□□□ 0.78
ATF3P18847 GRPEL2P1-201ENST00000453145 339 ntBASIC19.93■□□□□ 0.78
ATF3P18847 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
ATF3P18847 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms