Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MIR4259-201ENST00000584466 101 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL3L1P16619 AC073413.1-201ENST00000603927 732 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 MIR6805-201ENST00000615055 62 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCL3L1P16619 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CCL3L1P16619 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL3L1P16619 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL3L1P16619 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 AP000593.2-201ENST00000542775 1433 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.27□□□□□ -0.44
CCL3L1P16619 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 KRT8P4-201ENST00000509735 1454 ntBASIC12.27□□□□□ -0.44
CCL3L1P16619 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.27□□□□□ -0.44
CCL3L1P16619 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.27□□□□□ -0.44
CCL3L1P16619 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.27□□□□□ -0.44
CCL3L1P16619 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.27□□□□□ -0.44
CCL3L1P16619 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL3L1P16619 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 AC067750.1-201ENST00000608826 6545 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL3L1P16619 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL3L1P16619 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL3L1P16619 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CCL3L1P16619 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.27□□□□□ -0.45
CCL3L1P16619 AC131206.1-201ENST00000538078 1211 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL3L1P16619 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL3L1P16619 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CCL3L1P16619 AP006547.1-201ENST00000563435 692 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 AP005482.1-201ENST00000563722 1273 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 MIR4683-201ENST00000579659 81 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 RN7SL713P-201ENST00000582127 302 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.27□□□□□ -0.45
CCL3L1P16619 COX11-210ENST00000639671 696 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CCL3L1P16619 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL3L1P16619 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CCL3L1P16619 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL3L1P16619 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 SBF1P1-201ENST00000444527 5631 ntBASIC12.27□□□□□ -0.45
CCL3L1P16619 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CCL3L1P16619 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL3L1P16619 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL3L1P16619 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL3L1P16619 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL3L1P16619 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CCL3L1P16619 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL3L1P16619 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCL3L1P16619 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CCL3L1P16619 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL3L1P16619 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms