Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CD48P09326 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.37■□□□□ 0.05
CD48P09326 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.37■□□□□ 0.05
CD48P09326 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD48P09326 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 RN7SL832P-201ENST00000607781 1756 ntBASIC15.36■□□□□ 0.05
CD48P09326 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CD48P09326 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.36■□□□□ 0.05
CD48P09326 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.36■□□□□ 0.05
CD48P09326 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CD48P09326 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CD48P09326 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CD48P09326 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
CD48P09326 AL035633.1-201ENST00000406139 838 ntBASIC15.36■□□□□ 0.05
CD48P09326 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.36■□□□□ 0.05
CD48P09326 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.36■□□□□ 0.05
CD48P09326 AC078819.1-201ENST00000547454 765 ntBASIC15.36■□□□□ 0.05
CD48P09326 AC012085.1-201ENST00000548270 765 ntBASIC15.36■□□□□ 0.05
CD48P09326 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CD48P09326 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.36■□□□□ 0.05
CD48P09326 AC103988.2-201ENST00000561804 725 ntBASIC15.36■□□□□ 0.05
CD48P09326 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.36■□□□□ 0.05
CD48P09326 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.36■□□□□ 0.05
CD48P09326 OR10B1P-201ENST00000601666 907 ntBASIC15.36■□□□□ 0.05
CD48P09326 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.36■□□□□ 0.05
CD48P09326 AL022328.1-201ENST00000610050 478 ntBASIC15.36■□□□□ 0.05
CD48P09326 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.36■□□□□ 0.05
CD48P09326 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.36■□□□□ 0.05
CD48P09326 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CD48P09326 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.36■□□□□ 0.05
CD48P09326 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CD48P09326 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 NFIC-211ENST00000641145 8399 ntBASIC15.35■□□□□ 0.05
CD48P09326 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CD48P09326 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.35■□□□□ 0.05
CD48P09326 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CD48P09326 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CD48P09326 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 MIR4683-201ENST00000579659 81 ntBASIC15.35■□□□□ 0.05
CD48P09326 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CD48P09326 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.35■□□□□ 0.05
CD48P09326 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.35■□□□□ 0.05
CD48P09326 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.35■□□□□ 0.05
CD48P09326 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.35■□□□□ 0.05
CD48P09326 AC105233.6-201ENST00000642093 218 ntBASIC15.35■□□□□ 0.05
CD48P09326 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.35■□□□□ 0.05
CD48P09326 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.35■□□□□ 0.05
CD48P09326 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CD48P09326 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 AC090505.1-201ENST00000430515 1834 ntBASIC15.35■□□□□ 0.05
CD48P09326 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.35■□□□□ 0.05
CD48P09326 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.35■□□□□ 0.05
CD48P09326 AC139712.1-201ENST00000378256 1875 ntBASIC15.35■□□□□ 0.05
CD48P09326 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.35■□□□□ 0.05
CD48P09326 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CD48P09326 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms