Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 AC015656.1-201ENST00000624209 3578 ntBASIC13.98□□□□□ -0.17
CTSBP07858 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CTSBP07858 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSBP07858 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.98□□□□□ -0.17
CTSBP07858 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.98□□□□□ -0.17
CTSBP07858 AC144522.1-201ENST00000625111 1658 ntBASIC13.98□□□□□ -0.17
CTSBP07858 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CTSBP07858 AP001267.2-201ENST00000532619 2086 ntBASIC13.97□□□□□ -0.17
CTSBP07858 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSBP07858 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
CTSBP07858 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CTSBP07858 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSBP07858 AC012441.2-201ENST00000444843 739 ntBASIC13.97□□□□□ -0.17
CTSBP07858 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSBP07858 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 AC006122.1-201ENST00000493323 440 ntBASIC13.97□□□□□ -0.17
CTSBP07858 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSBP07858 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSBP07858 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSBP07858 RN7SL774P-201ENST00000577467 290 ntBASIC13.97□□□□□ -0.17
CTSBP07858 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.97□□□□□ -0.17
CTSBP07858 NDUFV2P1-201ENST00000596415 907 ntBASIC13.97□□□□□ -0.17
CTSBP07858 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSBP07858 AL606495.2-201ENST00000605867 535 ntBASIC13.97□□□□□ -0.17
CTSBP07858 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CTSBP07858 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSBP07858 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.97□□□□□ -0.17
CTSBP07858 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSBP07858 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSBP07858 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CTSBP07858 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSBP07858 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSBP07858 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSBP07858 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 KHSRPP1-201ENST00000427983 1768 ntBASIC13.96□□□□□ -0.17
CTSBP07858 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.96□□□□□ -0.17
CTSBP07858 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.96□□□□□ -0.17
CTSBP07858 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSBP07858 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.96□□□□□ -0.17
CTSBP07858 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CTSBP07858 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 AC139749.1-202ENST00000617529 3139 ntBASIC13.96□□□□□ -0.17
CTSBP07858 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CTSBP07858 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
CTSBP07858 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSBP07858 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CTSBP07858 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.96□□□□□ -0.17
CTSBP07858 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSBP07858 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CTSBP07858 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.96□□□□□ -0.17
CTSBP07858 MARK2P5-201ENST00000507649 634 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms