Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 GK-202ENST00000378941 458 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 AL136301.1-201ENST00000615830 422 ntBASIC15.94■□□□□ 0.14
HLA-DRAP01903 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRAP01903 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRAP01903 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AC139712.1-201ENST00000378256 1875 ntBASIC15.93■□□□□ 0.14
HLA-DRAP01903 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AL590440.2-201ENST00000641973 1595 ntBASIC15.93■□□□□ 0.14
HLA-DRAP01903 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 BNIP3P42-201ENST00000454982 569 ntBASIC15.93■□□□□ 0.14
HLA-DRAP01903 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 BNIP3P29-201ENST00000598302 571 ntBASIC15.93■□□□□ 0.14
HLA-DRAP01903 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AC011447.5-201ENST00000616168 564 ntBASIC15.93■□□□□ 0.14
HLA-DRAP01903 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AL023775.1-201ENST00000454907 1746 ntBASIC15.93■□□□□ 0.14
HLA-DRAP01903 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRAP01903 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRAP01903 MYADML-201ENST00000474610 2147 ntBASIC15.92■□□□□ 0.14
HLA-DRAP01903 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DRAP01903 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DRAP01903 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DRAP01903 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DRAP01903 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DRAP01903 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HLA-DRAP01903 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRAP01903 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms